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The Simple Way
Simple add the wsDestDir parameter to the woapplication task in your project's build.xml as shown below. As stated by the documentation, presence of that parameter triggers a split install and thus creates an additional woa bundle for the webserver resources.
<woapplication name="${project.name}" stdFrameworks="false"
destDir="${dest.dir}"
customInfoPListContent="${customInfoPListContent}"
principalClass="${principalClass}"
webXML="${webXML}"
webXML_CustomContent="${webXML_CustomContent}"
wsDestDir="/Library/WebServer/Documents/">
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